»Research for a life without cancer« is our mission at the German Cancer Research Center. We investigate how cancer develops, identify cancer risk factors and look for new cancer prevention strategies. We develop new methods with which tumors can be diagnosed more precisely and cancer patients can be treated more successfully. Every contribution counts - whether in research, administration or infrastructure. This is what makes our daily work so meaningful and exciting.
The Omics IT and Data Management Core Facility at the German Cancer Research Center (DKFZ) provides comprehensive support for large-scale omics projects, including secure data storage, high-throughput analysis, and tailored software solutions. By collaborating closely with researchers, we ensure robust bioinformatics pipelines and efficient workflows to drive breakthroughs in cancer research. To achieve this we develop custom software for data management and workflow execution.
Aufgaben:
We are looking for a software developer to work at the interface of the two in-house developed open-source applications WESkit ( https://gitlab.com/one-touch-pipeline/weskit ) and OTP ( https://gitlab.com/one-touch-pipeline/otp ).
Work in a small team on making WESkit production ready
Communicate with and support the OTP team in WESkit's installation, interfaces, and operation
Qualifikationen:
Python, including typed Python using Mypy, Celery, Flask
Teamwork and communication, including working in a distributed team
Agile software development, e.g. SCRUM
Container technologies, in particular Docker and Singularity
The following topics are relevant and experience in them is considered a bonus:
Software design and architecture
Object-oriented design patterns
Building robust, scalable, usable, production-quality software
Workflow management systems, in particular Snakemake and Nextflow
High-throughput cluster systems, in particular IBM LSF and SLURM
Knowledge of bioinformatics is not required, but you should be motivated to understand the domain.
The applicant must hold a university degree (including of applied sciences) in computer science, or a related field. Excellent communication and organization skills and proficiency in English are mandatory.
Wir bieten:
Excellent framework conditions: state-of-the-art equipment and opportunities for international networking at the highest level
30 days of vacation per year
Flexible working hours
Remuneration according to TV-L incl. company pension scheme and capital-forming benefits
Possibility of mobile work and part-time work
Family-friendly working environment
Sustainable travel to work: subsidized Germany job ticket
Unleash your full potential: targeted offers for your personal development to further develop your talents
Our Corporate Health Management Program offers a holistic approach to your well-being
Unser Kontakt:
Dr. Ivo Buchhalter
Phone: +49 6221 42 3566
Deutsches Krebsforschungszentrum | Im Neuenheimer Feld 280 | 69120 Heidelberg | www.dkfz.de
Weitere Informationen:
We are convinced that an innovative research and working environment thrives on the diversity of its employees. Therefore, we welcome applications from talented people, regardless of gender, cultural background, nationality, ethnicity, sexual identity, physical ability, religion and age. People with severe disabilities are given preference if they have the same aptitude.
Notice: We are subject to the regulations of the Infection Protection Act (IfSG). Therefore, all our employees must provide proof of immunity against measles.
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»Research for a life without cancer« is our mission at the German Cancer Research Center. We investigate how cancer develops, identify cancer risk factors and look for new cancer prevention strategies. We develop new methods with which tumors can be diagnosed more precisely and cancer patients can be treated more successfully. Every contribution counts - whether in research, administration or infrastructure. This is what makes our daily work so meaningful and exciting.
The Omics IT and Data Management Core Facility at the German Cancer Research Center (DKFZ) provides comprehensive support for large-scale omics projects, including secure data storage, high-throughput analysis, and tailored software solutions. By collaborating closely with researchers, we ensure robust bioinformatics pipelines and efficient workflows to drive breakthroughs in cancer research. To achieve this we develop custom software for data management and workflow execution.
Aufgaben:
We are looking for a software developer to work at the interface of the two in-house developed open-source applications WESkit ( https://gitlab.com/one-touch-pipeline/weskit ) and OTP ( https://gitlab.com/one-touch-pipeline/otp ).
Work in a small team on making WESkit production ready
Communicate with and support the OTP team in WESkit's installation, interfaces, and operation
Qualifikationen:
Python, including typed Python using Mypy, Celery, Flask
Teamwork and communication, including working in a distributed team
Agile software development, e.g. SCRUM
Container technologies, in particular Docker and Singularity
The following topics are relevant and experience in them is considered a bonus:
Software design and architecture
Object-oriented design patterns
Building robust, scalable, usable, production-quality software
Workflow management systems, in particular Snakemake and Nextflow
High-throughput cluster systems, in particular IBM LSF and SLURM
Knowledge of bioinformatics is not required, but you should be motivated to understand the domain.
The applicant must hold a university degree (including of applied sciences) in computer science, or a related field. Excellent communication and organization skills and proficiency in English are mandatory.
Wir bieten:
Excellent framework conditions: state-of-the-art equipment and opportunities for international networking at the highest level
30 days of vacation per year
Flexible working hours
Remuneration according to TV-L incl. company pension scheme and capital-forming benefits
Possibility of mobile work and part-time work
Family-friendly working environment
Sustainable travel to work: subsidized Germany job ticket
Unleash your full potential: targeted offers for your personal development to further develop your talents
Our Corporate Health Management Program offers a holistic approach to your well-being
Unser Kontakt:
Dr. Ivo Buchhalter
Phone: +49 6221 42 3566
Deutsches Krebsforschungszentrum | Im Neuenheimer Feld 280 | 69120 Heidelberg | www.dkfz.de
Weitere Informationen:
We are convinced that an innovative research and working environment thrives on the diversity of its employees. Therefore, we welcome applications from talented people, regardless of gender, cultural background, nationality, ethnicity, sexual identity, physical ability, religion and age. People with severe disabilities are given preference if they have the same aptitude.
Notice: We are subject to the regulations of the Infection Protection Act (IfSG). Therefore, all our employees must provide proof of immunity against measles.